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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858958.1_cds_XP_016514151.1_26630
CDS Infomation

[gene=LOC107830964] [db_xref=GeneID:107830964] [protein=shaggy-related protein kinase NtK-1] [protein_id=XP_016514151.1] [location=join(111920..112033,112149..112241,112376..112435,112514..112786,113085..113159,116615..116671,116776..116916,117007..117057,119612..119707,119802..119885,120854..120956,121037..121119)] [gbkey=CDS]
Sequence

ATGACTTCAGTAGGCTTAGCACCTGTATCCGGTTTGAGAGAATCCAGTAGCCATAATGTT
GGTGTAGATAGGCTGCCTGAGGAGATGAATGACATGAGAATCAGGGATGATAAGGAAATC
GAAGCAGCTATTGTAGATGGTAATGGGACTGAGACAGGCCATATAATAGTGACAACTACT
GGTGGTAGACATGGTCAGCCTAAACAGACTATCAGTTATATGGCTGAACGTATTGTTGGA
CAAGGATCATTTGGAGTAGTTTTCCAGGCAAAATGCTTAGAGACTGGTGAAACTGTTGCT
ATCAAAAAGGTTCTTCAAGACAAGAGATATAAGAACCGGGAGCTGCAGACCATGCGTCTT
CTTGATCACCCAAATGTTGTGTGCCTGAAGCATTGCTTCTTTTCCACAACTGAGAAGGAT
GAAGTATATCTTAATTTGGTTCTTGAATACGTCCCTGAAACTGTCCATCGCGTTATTAAA
CACTACAATAAGTTGAATCAAAGGATGCCATTGATACTGGTGAAGCTTTATACATATCAG
ATTTTCAGGGCGTTGTCTTACATCCATCACACAATCGGAGTGTGCCACAGGGACATCAAG
CCTCAGAATCTTTTGGTGAATCCACATACTCACCAGGTTAAATTGTGTGACTTTGGAAGT
GCTAAAGTTCTGGTTAAAGGAGAACCAAATATTTCTTACATCTGCTCTAGGTATTATAGA
GCGCCTGAACTTATATTTGGAGCAACAGAGTACACTTCTGCTATTGACATCTGGTCTGCT
GGCTGTGTTCTAGCTGAGCTACTTCTTGGGCAGCCTTTGTTTCCGGGTGAAAGTGGAGTT
GATCAGCTTGTTGAGATCATTAAGGTCTTGGGTACTCCTACAAGGGAAGAAATTAAATGC
ATGAATCCAAATTATAATGAGTTCAAATTCCCCCAAATTAAAGCTCATCCGTGGCACAAG
ATATTTCATAAGCGCATGCCTCCAGAAGCTGTTGATCTGGTTTCAAGACTACTGCAGTAC
TCACCTAACTTGCGTTGCTCTGCTTTAGAGGCAGTGACCCACGCCTTCTTCGATGAGCTT
CGTGATCCTAATACACGCCTCCCAAATGGCCGTGTCCTTCCTCCCTTGTTTAACTTTAAG
GCCCATGAGTTAAAGGGTGTCTCTGCAGAGACTCTATTGAAGTTGGTTCCAGAGCATGCC
AGAAAACAGTGCCCGTCCCTTGGTTTATGA

Peptide Sequence

PEP ID

XP_016514151.1
PEP Infomation

PREDICTED: shaggy-related protein kinase NtK-1 [Nicotiana tabacum]
Sequence

MTSVGLAPVSGLRESSSHNVGVDRLPEEMNDMRIRDDKEIEAAIVDGNGTETGHIIVTTT
GGRHGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRL
LDHPNVVCLKHCFFSTTEKDEVYLNLVLEYVPETVHRVIKHYNKLNQRMPLILVKLYTYQ
IFRALSYIHHTIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR
APELIFGATEYTSAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC
MNPNYNEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCSALEAVTHAFFDEL
RDPNTRLPNGRVLPPLFNFKAHELKGVSAETLLKLVPEHARKQCPSLGL

Transcript Sequence

Gene sequence data has not been registered.